Hierarchy For All Packages

Package Hierarchies:

• org.neuroml.model,
• org.neuroml.model.util,
• org.neuroml.model.util.hdf5

Class Hierarchy

• java.lang.Object
  • org.neuroml.model.BaseWithoutId (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Annotation (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Base (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.BaseProjection (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.ContinuousProjection (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.ElectricalProjection (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.Projection (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.CellSet (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelDensity (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.ChannelDensityVShift (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelDensityGHK (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelDensityGHK2 (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelDensityNernst (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.ChannelDensityNernstCa2 (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelDensityNonUniform (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelDensityNonUniformGHK (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelDensityNonUniformNernst (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ChannelPopulation (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ClosedState (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ExtracellularProperties (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ExtracellularPropertiesLocal (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ForwardTransition (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateFractional (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateFractionalSubgate (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateHHInstantaneous (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateHHRates (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateHHRatesInf (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateHHRatesTau (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateHHRatesTauInf (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateHHTauInf (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateHHUndetermined (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.GateKS (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.InhomogeneousParameter (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.InputList (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.OpenState (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ReactionScheme (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Region (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ReverseTransition (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.SegmentGroup (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Space (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Species (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Standalone (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.BaseCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.BaseCellMembPotCap (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.AdExIaFCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.HindmarshRose1984Cell (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.Izhikevich2007Cell (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.BasePyNNCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.BasePyNNIaFCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.BasePyNNIaFCondCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
                • org.neuroml.model.EIFCondExpIsfaIsta (implements org.jvnet.jaxb2_commons.lang.ToString2)
                  • org.neuroml.model.EIFCondAlphaIsfaIsta (implements org.jvnet.jaxb2_commons.lang.ToString2)
                • org.neuroml.model.IFCondAlpha (implements org.jvnet.jaxb2_commons.lang.ToString2)
                • org.neuroml.model.IFCondExp (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.IFCurrAlpha (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.IFCurrExp (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.HHCondExp (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.Cell (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.Cell2CaPools (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.FitzHughNagumo1969Cell (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.FitzHughNagumoCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.IafCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.IafRefCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.IafTauCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.IafTauRefCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.IzhikevichCell (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.PinskyRinzelCA3Cell (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.BaseSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.BaseCurrentBasedSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.AlphaCurrentSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.BasePynnSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.AlphaCondSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.AlphaCurrSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.ExpCondSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.ExpCurrSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.BaseVoltageDepSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.BaseConductanceBasedSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.AlphaSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.ExpOneSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.ExpTwoSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
                • org.neuroml.model.BlockingPlasticSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.BaseConductanceBasedSynapseTwo (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.ExpThreeSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.DoubleSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.GapJunction (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.GradedSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.LinearGradedSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.SilentSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.BiophysicalProperties (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.BiophysicalProperties2CaPools (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.CompoundInput (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.CompoundInputDL (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.DecayingPoolConcentrationModel (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.ConcentrationModelD (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.FixedFactorConcentrationModel (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.IonChannelKS (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.IonChannelScalable (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.IonChannel (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.IonChannelHH (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.IonChannelVShift (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.Morphology (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.Network (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.NeuroMLDocument (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.PoissonFiringSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.Population (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.PulseGenerator (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.PulseGeneratorDL (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.RampGenerator (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.RampGeneratorDL (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.SineGenerator (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.SineGeneratorDL (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.SpikeArray (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.SpikeGenerator (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.SpikeGeneratorPoisson (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.SpikeGeneratorRefPoisson (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.SpikeGeneratorRandom (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.SpikeSourcePoisson (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.TimedSynapticInput (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.TransientPoissonFiringSynapse (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.VoltageClamp (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.VoltageClampTriple (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.TauInfTransition (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.BaseNonNegativeIntegerId (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.BaseConnection (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.BaseConnectionNewFormat (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.ContinuousConnection (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.ContinuousConnectionInstance (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.ContinuousConnectionInstanceW (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.ElectricalConnection (implements org.jvnet.jaxb2_commons.lang.ToString2)
            • org.neuroml.model.ElectricalConnectionInstance (implements org.jvnet.jaxb2_commons.lang.ToString2)
              • org.neuroml.model.ElectricalConnectionInstanceW (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.BaseConnectionOldFormat (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.Connection (implements org.jvnet.jaxb2_commons.lang.ToString2)
          • org.neuroml.model.ConnectionWD (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Input (implements org.jvnet.jaxb2_commons.lang.ToString2)
        • org.neuroml.model.InputW (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Segment (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Spike (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.BlockMechanism (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Constant (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.DistalDetails (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.ExplicitInput (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Exposure (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.GridLayout (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.HHRate (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.HHTime (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.HHVariable (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Include (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.InhomogeneousValue (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.InitMembPotential (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Instance (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.IntracellularProperties (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.IntracellularProperties2CaPools (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Layout (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Location (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Member (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.MembraneProperties (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.MembraneProperties2CaPools (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.NamedDimensionalType (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.DerivedParameter (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.LEMSProperty (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Parameter (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.Requirement (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.NamedDimensionalVariable (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.ConditionalDerivedVariable (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.DerivedVariable (implements org.jvnet.jaxb2_commons.lang.ToString2)
      • org.neuroml.model.StateVariable (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Path (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.PlasticityMechanism (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Point3DWithDiam (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Property (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.ProximalDetails (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Q10ConductanceScaling (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.RandomLayout (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.Resistivity (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.SegmentEndPoint (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.SegmentParent (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.SpaceStructure (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.SpecificCapacitance (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.SpikeThresh (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.SubTree (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.SynapticConnection (implements org.jvnet.jaxb2_commons.lang.ToString2)
    • org.neuroml.model.UnstructuredLayout (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.Case (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.util.CellUtils
  • org.neuroml.model.ComponentType (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.Dynamics (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.EventOut (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.util.hdf5.Hdf5Utils
  • org.neuroml.model.IncludeType (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.InstanceRequirement (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.util.hdf5.NetworkHelper
  • org.neuroml.model.util.NeuroML2Validator
  • org.neuroml.model.util.NeuroMLConverter
  • org.neuroml.model.util.NeuroMLElements
  • org.neuroml.model.util.hdf5.NeuroMLHDF5Reader
  • org.neuroml.model.util.hdf5.NeuroMLHDF5Writer
  • org.neuroml.model.util.NeuroMLNamespacePrefixMapper
  • org.neuroml.model.ObjectFactory
  • org.neuroml.model.OnCondition (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.OnEntry (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.OnEvent (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.OnStart (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.Q10Settings (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.Regime (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.util.StandardTest
  • org.neuroml.model.StateAssignment (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.neuroml.model.util.hdf5.Hdf5Exception
      • org.neuroml.model.util.NeuroMLException
  • org.neuroml.model.TimeDerivative (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.Transition (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • org.neuroml.model.util.UnitsFormatterUtils
  • org.neuroml.model.VariableParameter (implements org.jvnet.jaxb2_commons.lang.ToString2)
  • javax.xml.bind.annotation.adapters.XmlAdapter<ValueType,BoundType>
    • org.neuroml.model.Adapter1
    • org.neuroml.model.Adapter2

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
    • org.neuroml.model.AllowedSpaces
    • org.neuroml.model.BlockTypes
    • org.neuroml.model.ChannelTypes
    • org.neuroml.model.GateTypes
    • org.neuroml.model.Metric
    • org.neuroml.model.NetworkTypes
    • org.neuroml.model.PlasticityTypes
    • org.neuroml.model.PopulationTypes
    • org.neuroml.model.util.StandardTest.LEVEL
    • org.neuroml.model.TrueOrFalse