Package org.neuroml.model.util

Class NeuroML2Validator

java.lang.Object

org.neuroml.model.util.NeuroML2Validator

public class NeuroML2Validator
extends Object

Field Summary

Fields

Modifier and Type	Field	Description
static final String	NO_WARNINGS
StandardTest	TEST_CONC_MODEL_EXISTS
StandardTest	TEST_FORMATTING_CELL_ID_IN_CONNECTION
StandardTest	TEST_INCLUDE_SEGMENT_GROUP_EXISTS
StandardTest	TEST_INCLUDED_FILES_EXIST
StandardTest	TEST_ION_CHANNEL_EXISTS
StandardTest	TEST_MEMBER_SEGMENT_EXISTS
StandardTest	TEST_NETWORK_REPEATED_IDS
StandardTest	TEST_NUM_INT_DIVS_SEGMENT_GROUP
StandardTest	TEST_ONE_SEG_MISSING_PARENT
StandardTest	TEST_POPULATION_COMPONENT_EXISTS
StandardTest	TEST_POPULATION_SIZE_MATCHES_INSTANCES
StandardTest	TEST_POPULATIONS_IN_PROJECTIONS
StandardTest	TEST_REPEATED_GROUPS
StandardTest	TEST_REPEATED_IDS
StandardTest	TEST_SEGMENT_GROUP_IN_BIOPHYSICS_EXISTS
StandardTest	TEST_SEGMENT_ID_IN_CONNECTION
StandardTest	TEST_SYNAPSE_IN_PROJECTION
StandardTest	TEST_TOP_LEVEL_REPEATED_IDS
static final String	VALID_AGAINST_SCHEMA
static final String	VALID_AGAINST_SCHEMA_AND_TESTS
static final String	VALID_AGAINST_TESTS
StandardTest	WARN_INCLUDE_SEGMENT_GROUP_ORDER
StandardTest	WARN_ROOT_ID_0

Constructor Summary

Constructors

Constructor	Description
NeuroML2Validator()

Method Summary

Modifier and Type	Method	Description
String	getValidity()
String	getWarnings()
boolean	hasWarnings()
boolean	isValid()
static void	main(String[] args)
final void	reset()
void	setBaseDirectory(File f)
static void	testValidity(File xmlFile, String xsdFile)
static void	testValidity(File xmlFile, StreamSource schemaFileSource)
void	testValidityAgainstNeuroML2Schema(File xmlFile)
void	validateWithTests(File xmlFile)
void	validateWithTests(NeuroMLDocument nml2)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

VALID_AGAINST_SCHEMA

public static final String VALID_AGAINST_SCHEMA

See Also:

• Constant Field Values

VALID_AGAINST_TESTS

public static final String VALID_AGAINST_TESTS

See Also:

• Constant Field Values

VALID_AGAINST_SCHEMA_AND_TESTS

public static final String VALID_AGAINST_SCHEMA_AND_TESTS

See Also:

• Constant Field Values

NO_WARNINGS

public static final String NO_WARNINGS

See Also:

• Constant Field Values

TEST_TOP_LEVEL_REPEATED_IDS

public StandardTest TEST_TOP_LEVEL_REPEATED_IDS

TEST_NETWORK_REPEATED_IDS

public StandardTest TEST_NETWORK_REPEATED_IDS

TEST_REPEATED_IDS

public StandardTest TEST_REPEATED_IDS

TEST_ONE_SEG_MISSING_PARENT

public StandardTest TEST_ONE_SEG_MISSING_PARENT

TEST_MEMBER_SEGMENT_EXISTS

public StandardTest TEST_MEMBER_SEGMENT_EXISTS

TEST_REPEATED_GROUPS

public StandardTest TEST_REPEATED_GROUPS

WARN_INCLUDE_SEGMENT_GROUP_ORDER

public StandardTest WARN_INCLUDE_SEGMENT_GROUP_ORDER

TEST_INCLUDE_SEGMENT_GROUP_EXISTS

public StandardTest TEST_INCLUDE_SEGMENT_GROUP_EXISTS

TEST_SEGMENT_GROUP_IN_BIOPHYSICS_EXISTS

public StandardTest TEST_SEGMENT_GROUP_IN_BIOPHYSICS_EXISTS

TEST_NUM_INT_DIVS_SEGMENT_GROUP

public StandardTest TEST_NUM_INT_DIVS_SEGMENT_GROUP

TEST_INCLUDED_FILES_EXIST

public StandardTest TEST_INCLUDED_FILES_EXIST

TEST_POPULATION_COMPONENT_EXISTS

public StandardTest TEST_POPULATION_COMPONENT_EXISTS

TEST_ION_CHANNEL_EXISTS

public StandardTest TEST_ION_CHANNEL_EXISTS

TEST_CONC_MODEL_EXISTS

public StandardTest TEST_CONC_MODEL_EXISTS

TEST_POPULATION_SIZE_MATCHES_INSTANCES

public StandardTest TEST_POPULATION_SIZE_MATCHES_INSTANCES

TEST_POPULATIONS_IN_PROJECTIONS

public StandardTest TEST_POPULATIONS_IN_PROJECTIONS

TEST_SEGMENT_ID_IN_CONNECTION

public StandardTest TEST_SEGMENT_ID_IN_CONNECTION

TEST_FORMATTING_CELL_ID_IN_CONNECTION

public StandardTest TEST_FORMATTING_CELL_ID_IN_CONNECTION

TEST_SYNAPSE_IN_PROJECTION

public StandardTest TEST_SYNAPSE_IN_PROJECTION

WARN_ROOT_ID_0

public StandardTest WARN_ROOT_ID_0

Constructor Details

NeuroML2Validator

public NeuroML2Validator()

Method Details

reset

public final void reset()

getValidity

public String getValidity()

isValid

public boolean isValid()

getWarnings

public String getWarnings()

hasWarnings

public boolean hasWarnings()

setBaseDirectory

public void setBaseDirectory(File f)

validateWithTests

public void validateWithTests(File xmlFile)
                       throws SAXException,
IOException,
NeuroMLException

Throws:

SAXException

IOException

NeuroMLException

validateWithTests

public void validateWithTests(NeuroMLDocument nml2)
                       throws NeuroMLException

Throws:

NeuroMLException

testValidityAgainstNeuroML2Schema

public void testValidityAgainstNeuroML2Schema(File xmlFile)
                                       throws SAXException,
IOException

Throws:

SAXException

IOException

testValidity

public static void testValidity(File xmlFile,
 String xsdFile)
                         throws SAXException,
IOException

Throws:

SAXException

IOException

testValidity

public static void testValidity(File xmlFile,
 StreamSource schemaFileSource)
                         throws SAXException,
IOException

Throws:

SAXException

IOException

main

public static void main(String[] args)
                 throws Exception

Throws:

Exception