Package org.neuroml.model

Class ChannelDensityNonUniformGHK

java.lang.Object
org.neuroml.model.BaseWithoutId
org.neuroml.model.Base
org.neuroml.model.ChannelDensityNonUniformGHK
All Implemented Interfaces:
org.jvnet.jaxb2_commons.lang.ToString2
public class ChannelDensityNonUniformGHK extends Base implements org.jvnet.jaxb2_commons.lang.ToString2
Specifies a time varying conductance density, which is distributed on a region of the **cell,** and whose current is calculated from the Goldman-Hodgkin-Katz equation. Hard coded for Ca only!. The conductance density of the channel is not uniform, but is set using the **variableParameter** . Note, there is no dynamical description of this in LEMS yet, as this type only makes sense for multicompartmental cells. A ComponentType for this needs to be present to enable export of NeuroML 2 multicompartmental cells via LEMS/jNeuroML to NEURON

Java class for ChannelDensityNonUniformGHK complex type.

The following schema fragment specifies the expected content contained within this class. 

 <complexType name="ChannelDensityNonUniformGHK">
   <complexContent>
     <extension base="{http://www.neuroml.org/schema/neuroml2}Base">
       <sequence>
         <element name="variableParameter" type="{http://www.neuroml.org/schema/neuroml2}VariableParameter" maxOccurs="unbounded" minOccurs="0"/>
       </sequence>
       <attribute name="ionChannel" use="required" type="{http://www.neuroml.org/schema/neuroml2}NmlId" />
       <attribute name="ion" use="required" type="{http://www.neuroml.org/schema/neuroml2}NmlId" />
     </extension>
   </complexContent>
 </complexType>

  • Field Details

  • Constructor Details

    • ChannelDensityNonUniformGHK

      public ChannelDensityNonUniformGHK()

  • Method Details

    • getVariableParameter

      public List<VariableParameter> getVariableParameter()
      Gets the value of the variableParameter property.

      This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the variableParameter property.

      For example, to add a new item, do as follows: 

          getVariableParameter().add(newItem);

      Objects of the following type(s) are allowed in the list VariableParameter

    • getIonChannel

      public String getIonChannel()
      Gets the value of the ionChannel property.
      Returns:
      possible object is String

    • setIonChannel

      public void setIonChannel(String value)
      Sets the value of the ionChannel property.
      Parameters:
      value - allowed object is String

    • getIon

      public String getIon()
      Gets the value of the ion property.
      Returns:
      possible object is String

    • setIon

      public void setIon(String value)
      Sets the value of the ion property.
      Parameters:
      value - allowed object is String

    • toString

      public String toString()
      Overrides:
      toString in class Base

    • append

      public StringBuilder append(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, StringBuilder buffer, org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)
      Specified by:
      append in interface org.jvnet.jaxb2_commons.lang.ToString2
      Overrides:
      append in class Base

    • appendFields

      public StringBuilder appendFields(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, StringBuilder buffer, org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)
      Specified by:
      appendFields in interface org.jvnet.jaxb2_commons.lang.ToString2
      Overrides:
      appendFields in class Base