Package org.neuroml.model.util.hdf5

Class Hdf5Utils

java.lang.Object

org.neuroml.model.util.hdf5.Hdf5Utils

public class Hdf5Utils
extends Object

Constructor Summary

Constructors

Constructor	Description
Hdf5Utils()

Method Summary

Modifier and Type	Method	Description
static void	addStringAttribute(ncsa.hdf.object.Group group, String name, String value, ncsa.hdf.object.h5.H5File h5File)
static void	close(ncsa.hdf.object.h5.H5File h5File)
static ncsa.hdf.object.h5.H5File	createH5file(File file)
static String	getFirstStringValAttr(ArrayList<ncsa.hdf.object.Attribute> attrs, String attrName)
static ncsa.hdf.object.Group	getRootGroup(ncsa.hdf.object.h5.H5File h5File)
static ncsa.hdf.object.Attribute	getSimpleAttr(String name, String value, ncsa.hdf.object.h5.H5File h5File)
static void	main(String[] args)
static void	open(ncsa.hdf.object.h5.H5File h5File)
static ncsa.hdf.object.h5.H5File	openForRead(File f)
static ncsa.hdf.object.h5.H5File	openH5file(File file)
static float[][]	parse2Ddataset(ncsa.hdf.object.Dataset d)
static String	parseAttribute(ncsa.hdf.object.Attribute a, String indent, Properties p, boolean returnOnlyValueString)
static ArrayList<ncsa.hdf.object.Attribute>	parseDatasetForAttributes(ncsa.hdf.object.Dataset d)
static ArrayList<ncsa.hdf.object.Attribute>	parseGroupForAttributes(ncsa.hdf.object.Group g)
static void	setVerbose(boolean v)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

Hdf5Utils

public Hdf5Utils()

Method Details

setVerbose

public static void setVerbose(boolean v)

getSimpleAttr

public static ncsa.hdf.object.Attribute getSimpleAttr(String name,
 String value,
 ncsa.hdf.object.h5.H5File h5File)
                                               throws Exception

Throws:

Exception

addStringAttribute

public static void addStringAttribute(ncsa.hdf.object.Group group,
 String name,
 String value,
 ncsa.hdf.object.h5.H5File h5File)
                               throws Exception

Throws:

Exception

createH5file

public static ncsa.hdf.object.h5.H5File createH5file(File file)
                                              throws Hdf5Exception

Throws:

Hdf5Exception

openH5file

public static ncsa.hdf.object.h5.H5File openH5file(File file)
                                            throws Hdf5Exception

Throws:

Hdf5Exception

open

public static void open(ncsa.hdf.object.h5.H5File h5File)
                 throws Hdf5Exception

Throws:

Hdf5Exception

openForRead

public static ncsa.hdf.object.h5.H5File openForRead(File f)
                                             throws Hdf5Exception

Throws:

Hdf5Exception

close

public static void close(ncsa.hdf.object.h5.H5File h5File)
                  throws Hdf5Exception

Throws:

Hdf5Exception

getFirstStringValAttr

public static String getFirstStringValAttr(ArrayList<ncsa.hdf.object.Attribute> attrs,
 String attrName)

parseGroupForAttributes

public static ArrayList<ncsa.hdf.object.Attribute> parseGroupForAttributes(ncsa.hdf.object.Group g)
                                                                    throws Hdf5Exception

Throws:

Hdf5Exception

parseDatasetForAttributes

public static ArrayList<ncsa.hdf.object.Attribute> parseDatasetForAttributes(ncsa.hdf.object.Dataset d)
                                                                      throws Hdf5Exception

Throws:

Hdf5Exception

getRootGroup

public static ncsa.hdf.object.Group getRootGroup(ncsa.hdf.object.h5.H5File h5File)
                                          throws Hdf5Exception

Throws:

Hdf5Exception

parseAttribute

public static String parseAttribute(ncsa.hdf.object.Attribute a,
 String indent,
 Properties p,
 boolean returnOnlyValueString)

parse2Ddataset

public static float[][] parse2Ddataset(ncsa.hdf.object.Dataset d)
                                throws Hdf5Exception

Throws:

Hdf5Exception

main

public static void main(String[] args)
                 throws IOException,
Hdf5Exception

Throws:

IOException

Hdf5Exception