Uses of Class
org.neuroml.model.util.NeuroMLException
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Uses of NeuroMLException in org.neuroml.model.util
Modifier and TypeMethodDescriptionstatic void
NeuroMLConverter.addElementToDocument
(NeuroMLDocument nmlDocument, Standalone nmlElement) static LinkedHashMap<String,
Standalone> NeuroMLConverter.getAllStandaloneElements
(NeuroMLDocument nmlDocument) static double
CellUtils.getFractionAlongSegGroupLength
(Cell cell, String segmentGroup, int segmentId, float fractAlongSegment) static SegmentGroup
CellUtils.getSegmentGroup
(Cell cell, String id) CellUtils.getSegmentsInGroup
(Cell cell, String segmentGroup) CellUtils.getSegmentsInGroup
(Cell cell, LinkedHashMap<String, SegmentGroup> namesVsSegmentGroups, SegmentGroup segmentGroup) static Segment
CellUtils.getSegmentWithId
(Cell cell, int segmentId) NeuroMLConverter.loadNeuroML
(File xmlFile) NeuroMLConverter.loadNeuroML
(File xmlFile, boolean includeIncludes) NeuroMLConverter.loadNeuroML
(File xmlFile, boolean includeIncludes, boolean failOnMissingIncludes) NeuroMLConverter.loadNeuroML
(File xmlFile, boolean includeIncludes, boolean failOnMissingIncludes, ArrayList<String> alreadyIncluded) NeuroMLConverter.loadNeuroML
(String nml2Contents) NeuroMLConverter.loadNeuroML
(String nml2Contents, boolean includeIncludes, File baseDirectoryForIncludes) NeuroMLConverter.loadNeuroML
(String nml2Contents, boolean includeIncludes, File baseDirectoryForIncludes, ArrayList<String> alreadyIncluded) NeuroMLConverter.loadNeuroMLOptimized
(File xmlOrH5File) NeuroMLConverter.loadNeuroMLOptimized
(File xmlOrH5File, boolean includeIncludes) NeuroMLConverter.loadNeuroMLOptimized
(String xml) NeuroMLConverter.neuroml2ToXml
(NeuroMLDocument nml2) NeuroMLConverter.neuroml2ToXml
(NeuroMLDocument nml2, String filename) static String
NeuroMLConverter.summary
(NeuroMLDocument nmlDocument) static String
NeuroMLConverter.summary
(NeuroMLDocument nmlDocument, boolean full) NeuroMLConverter.urlToNeuroML
(URL url) void
NeuroML2Validator.validateWithTests
(File xmlFile) void
NeuroML2Validator.validateWithTests
(NeuroMLDocument nml2) NeuroMLConverter.xmlToMorphology
(String xmlFile) -
Uses of NeuroMLException in org.neuroml.model.util.hdf5
Modifier and TypeMethodDescriptionNetworkHelper.getConnection
(String projectionId, int index) NetworkHelper.getLocation
(String populationId, int index, boolean failIfNonSpatialPop) int
NetworkHelper.getNumberConnections
(String projectionId) NetworkHelper.getPopulationComponent
(String populationId) int
NetworkHelper.getPopulationSize
(String populationId) NetworkHelper.getPopulationType
(String populationId) NeuroMLHDF5Reader.parse
(File hdf5File, boolean includeConnections, ArrayList<String> alreadyIncluded) NeuroMLHDF5Reader.parse
(File hdf5File, boolean includeConnections, ArrayList<String> alreadyIncluded, boolean includeIncludes) protected void
NeuroMLHDF5Reader.parseGroup
(ncsa.hdf.object.Group g) NeuroMLHDF5Reader.parseOptimized
(File hdf5File) NeuroMLHDF5Reader.parseOptimized
(File hdf5File, boolean includeIncludes) boolean
NetworkHelper.populationHasPositions
(String populationId) protected void
NeuroMLHDF5Reader.startGroup
(ncsa.hdf.object.Group g)