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NeuroML C++ API
2.3.0
C++ API for NeuroML 2
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Class corresponding to the FitzHughNagumo1969Cell schema type. More...
#include <NeuroML_v2.3.hxx>
a | |
Accessor and modifier functions for the a required attribute. | |
typedef ::neuroml2::Nml2Quantity_none | a_type |
Attribute type. | |
typedef ::xsd::cxx::tree::traits< a_type, char > | a_traits |
Attribute traits type. | |
const a_type & | a () const |
Return a read-only (constant) reference to the attribute. More... | |
a_type & | a () |
Return a read-write reference to the attribute. More... | |
void | a (const a_type &x) |
Set the attribute value. More... | |
void | a (::std::unique_ptr< a_type > p) |
Set the attribute value without copying. More... | |
b | |
Accessor and modifier functions for the b required attribute. | |
typedef ::neuroml2::Nml2Quantity_none | b_type |
Attribute type. | |
typedef ::xsd::cxx::tree::traits< b_type, char > | b_traits |
Attribute traits type. | |
const b_type & | b () const |
Return a read-only (constant) reference to the attribute. More... | |
b_type & | b () |
Return a read-write reference to the attribute. More... | |
void | b (const b_type &x) |
Set the attribute value. More... | |
void | b (::std::unique_ptr< b_type > p) |
Set the attribute value without copying. More... | |
I | |
Accessor and modifier functions for the I required attribute. | |
typedef ::neuroml2::Nml2Quantity_none | I_type |
Attribute type. | |
typedef ::xsd::cxx::tree::traits< I_type, char > | I_traits |
Attribute traits type. | |
const I_type & | I () const |
Return a read-only (constant) reference to the attribute. More... | |
I_type & | I () |
Return a read-write reference to the attribute. More... | |
void | I (const I_type &x) |
Set the attribute value. More... | |
void | I (::std::unique_ptr< I_type > p) |
Set the attribute value without copying. More... | |
phi | |
Accessor and modifier functions for the phi required attribute. | |
typedef ::neuroml2::Nml2Quantity_none | phi_type |
Attribute type. | |
typedef ::xsd::cxx::tree::traits< phi_type, char > | phi_traits |
Attribute traits type. | |
const phi_type & | phi () const |
Return a read-only (constant) reference to the attribute. More... | |
phi_type & | phi () |
Return a read-write reference to the attribute. More... | |
void | phi (const phi_type &x) |
Set the attribute value. More... | |
void | phi (::std::unique_ptr< phi_type > p) |
Set the attribute value without copying. More... | |
V0 | |
Accessor and modifier functions for the V0 required attribute. | |
typedef ::neuroml2::Nml2Quantity_none | V0_type |
Attribute type. | |
typedef ::xsd::cxx::tree::traits< V0_type, char > | V0_traits |
Attribute traits type. | |
const V0_type & | V0 () const |
Return a read-only (constant) reference to the attribute. More... | |
V0_type & | V0 () |
Return a read-write reference to the attribute. More... | |
void | V0 (const V0_type &x) |
Set the attribute value. More... | |
void | V0 (::std::unique_ptr< V0_type > p) |
Set the attribute value without copying. More... | |
W0 | |
Accessor and modifier functions for the W0 required attribute. | |
typedef ::neuroml2::Nml2Quantity_none | W0_type |
Attribute type. | |
typedef ::xsd::cxx::tree::traits< W0_type, char > | W0_traits |
Attribute traits type. | |
const W0_type & | W0 () const |
Return a read-only (constant) reference to the attribute. More... | |
W0_type & | W0 () |
Return a read-write reference to the attribute. More... | |
void | W0 (const W0_type &x) |
Set the attribute value. More... | |
void | W0 (::std::unique_ptr< W0_type > p) |
Set the attribute value without copying. More... | |
Constructors | |
FitzHughNagumo1969Cell (const id_type &, const a_type &, const b_type &, const I_type &, const phi_type &, const V0_type &, const W0_type &) | |
Create an instance from the ultimate base and initializers for required elements and attributes. | |
FitzHughNagumo1969Cell (const ::xercesc::DOMElement &e, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Create an instance from a DOM element. More... | |
FitzHughNagumo1969Cell (const FitzHughNagumo1969Cell &x, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Copy constructor. More... | |
virtual FitzHughNagumo1969Cell * | _clone (::xml_schema::flags f=0, ::xml_schema::container *c=0) const |
Copy the instance polymorphically. More... | |
FitzHughNagumo1969Cell & | operator= (const FitzHughNagumo1969Cell &x) |
Copy assignment operator. More... | |
virtual | ~FitzHughNagumo1969Cell () |
Destructor. | |
Additional Inherited Members | |
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typedef ::neuroml2::NeuroLexId | neuroLexId_type |
Attribute type. | |
typedef ::xsd::cxx::tree::optional< neuroLexId_type > | neuroLexId_optional |
Attribute optional container type. | |
typedef ::xsd::cxx::tree::traits< neuroLexId_type, char > | neuroLexId_traits |
Attribute traits type. | |
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typedef ::neuroml2::Notes | notes_type |
Element type. | |
typedef ::xsd::cxx::tree::optional< notes_type > | notes_optional |
Element optional container type. | |
typedef ::xsd::cxx::tree::traits< notes_type, char > | notes_traits |
Element traits type. | |
typedef ::neuroml2::Property | property_type |
Element type. | |
typedef ::xsd::cxx::tree::sequence< property_type > | property_sequence |
Element sequence container type. | |
typedef property_sequence::iterator | property_iterator |
Element iterator type. | |
typedef property_sequence::const_iterator | property_const_iterator |
Element constant iterator type. | |
typedef ::xsd::cxx::tree::traits< property_type, char > | property_traits |
Element traits type. | |
typedef ::neuroml2::Annotation | annotation_type |
Element type. | |
typedef ::xsd::cxx::tree::optional< annotation_type > | annotation_optional |
Element optional container type. | |
typedef ::xsd::cxx::tree::traits< annotation_type, char > | annotation_traits |
Element traits type. | |
typedef ::neuroml2::MetaId | metaid_type |
Attribute type. | |
typedef ::xsd::cxx::tree::optional< metaid_type > | metaid_optional |
Attribute optional container type. | |
typedef ::xsd::cxx::tree::traits< metaid_type, char > | metaid_traits |
Attribute traits type. | |
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typedef ::neuroml2::NmlId | id_type |
Attribute type. | |
typedef ::xsd::cxx::tree::traits< id_type, char > | id_traits |
Attribute traits type. | |
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const neuroLexId_optional & | neuroLexId () const |
Return a read-only (constant) reference to the attribute container. More... | |
neuroLexId_optional & | neuroLexId () |
Return a read-write reference to the attribute container. More... | |
void | neuroLexId (const neuroLexId_type &x) |
Set the attribute value. More... | |
void | neuroLexId (const neuroLexId_optional &x) |
Set the attribute value. More... | |
void | neuroLexId (::std::unique_ptr< neuroLexId_type > p) |
Set the attribute value without copying. More... | |
BaseCell (const id_type &) | |
Create an instance from the ultimate base and initializers for required elements and attributes. | |
BaseCell (const ::xercesc::DOMElement &e, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Create an instance from a DOM element. More... | |
BaseCell (const BaseCell &x, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Copy constructor. More... | |
BaseCell & | operator= (const BaseCell &x) |
Copy assignment operator. More... | |
virtual | ~BaseCell () |
Destructor. | |
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const notes_optional & | notes () const |
Return a read-only (constant) reference to the element container. More... | |
notes_optional & | notes () |
Return a read-write reference to the element container. More... | |
void | notes (const notes_type &x) |
Set the element value. More... | |
void | notes (const notes_optional &x) |
Set the element value. More... | |
void | notes (::std::unique_ptr< notes_type > p) |
Set the element value without copying. More... | |
const property_sequence & | property () const |
Return a read-only (constant) reference to the element sequence. More... | |
property_sequence & | property () |
Return a read-write reference to the element sequence. More... | |
void | property (const property_sequence &s) |
Copy elements from a given sequence. More... | |
const annotation_optional & | annotation () const |
Return a read-only (constant) reference to the element container. More... | |
annotation_optional & | annotation () |
Return a read-write reference to the element container. More... | |
void | annotation (const annotation_type &x) |
Set the element value. More... | |
void | annotation (const annotation_optional &x) |
Set the element value. More... | |
void | annotation (::std::unique_ptr< annotation_type > p) |
Set the element value without copying. More... | |
const metaid_optional & | metaid () const |
Return a read-only (constant) reference to the attribute container. More... | |
metaid_optional & | metaid () |
Return a read-write reference to the attribute container. More... | |
void | metaid (const metaid_type &x) |
Set the attribute value. More... | |
void | metaid (const metaid_optional &x) |
Set the attribute value. More... | |
void | metaid (::std::unique_ptr< metaid_type > p) |
Set the attribute value without copying. More... | |
Standalone (const id_type &) | |
Create an instance from the ultimate base and initializers for required elements and attributes. | |
Standalone (const ::xercesc::DOMElement &e, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Create an instance from a DOM element. More... | |
Standalone (const Standalone &x, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Copy constructor. More... | |
Standalone & | operator= (const Standalone &x) |
Copy assignment operator. More... | |
virtual | ~Standalone () |
Destructor. | |
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const id_type & | id () const |
Return a read-only (constant) reference to the attribute. More... | |
id_type & | id () |
Return a read-write reference to the attribute. More... | |
void | id (const id_type &x) |
Set the attribute value. More... | |
void | id (::std::unique_ptr< id_type > p) |
Set the attribute value without copying. More... | |
Base (const id_type &) | |
Create an instance from the ultimate base and initializers for required elements and attributes. | |
Base (const ::xercesc::DOMElement &e, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Create an instance from a DOM element. More... | |
Base (const Base &x, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Copy constructor. More... | |
Base & | operator= (const Base &x) |
Copy assignment operator. More... | |
virtual | ~Base () |
Destructor. | |
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BaseWithoutId () | |
Create an instance from the ultimate base and initializers for required elements and attributes. | |
BaseWithoutId (const ::xercesc::DOMElement &e, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Create an instance from a DOM element. More... | |
BaseWithoutId (const ::xercesc::DOMAttr &a, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Create an instance from a DOM attribute. More... | |
BaseWithoutId (const ::std::string &s, const ::xercesc::DOMElement *e, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Create an instance from a string fragment. More... | |
BaseWithoutId (const BaseWithoutId &x, ::xml_schema::flags f=0, ::xml_schema::container *c=0) | |
Copy constructor. More... | |
virtual | ~BaseWithoutId () |
Destructor. | |
Class corresponding to the FitzHughNagumo1969Cell schema type.
The Fitzhugh Nagumo model is a two-dimensional simplification of the Hodgkin-Huxley model of spike generation in squid giant axons. This system was suggested by FitzHugh ( FitzHugh R. [1961]: Impulses and physiological states in theoretical models of nerve membrane. Biophysical J. 1:445-466 ), who called it " Bonhoeffer-van der Pol
model ", and the equivalent circuit by Nagumo et al. ( Nagumo J. , Arimoto S. , and Yoshizawa S. [1962] An active pulse transmission line simulating nerve axon. Proc IRE. 50:2061-2070. 1962 ). This version corresponds to the one described in FitzHugh R. [1969]: Mathematical models of excitation and propagation in nerve. Chapter 1 ( pp. 1-85 in H. P. Schwan, ed. Biological Engineering, McGraw-Hill Book Co. , N. Y. )
:param a: :type a: none :param b: :type b: none :param I: plays the role of an external injected current :type I: none :param phi: :type phi: none :param V0: :type V0: none :param W0: :type W0: none
Definition at line 34842 of file NeuroML_v2.3.hxx.
neuroml2::FitzHughNagumo1969Cell::FitzHughNagumo1969Cell | ( | const ::xercesc::DOMElement & | e, |
::xml_schema::flags | f = 0 , |
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::xml_schema::container * | c = 0 |
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) |
Create an instance from a DOM element.
e | A DOM element to extract the data from. |
f | Flags to create the new instance with. |
c | A pointer to the object that will contain the new instance. |
Definition at line 32911 of file NeuroML_v2.3.cxx.
neuroml2::FitzHughNagumo1969Cell::FitzHughNagumo1969Cell | ( | const FitzHughNagumo1969Cell & | x, |
::xml_schema::flags | f = 0 , |
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::xml_schema::container * | c = 0 |
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) |
Copy constructor.
x | An instance to make a copy of. |
f | Flags to create the copy with. |
c | A pointer to the object that will contain the copy. |
For polymorphic object models use the _clone
function instead.
Definition at line 32897 of file NeuroML_v2.3.cxx.
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virtual |
Copy the instance polymorphically.
f | Flags to create the copy with. |
c | A pointer to the object that will contain the copy. |
This function ensures that the dynamic type of the instance is used for copying and should be used for polymorphic object models instead of the copy constructor.
Reimplemented from neuroml2::BaseCell.
Definition at line 33024 of file NeuroML_v2.3.cxx.
FitzHughNagumo1969Cell::a_type & neuroml2::FitzHughNagumo1969Cell::a | ( | ) |
Return a read-write reference to the attribute.
Definition at line 8277 of file NeuroML_v2.3.cxx.
const FitzHughNagumo1969Cell::a_type & neuroml2::FitzHughNagumo1969Cell::a | ( | ) | const |
Return a read-only (constant) reference to the attribute.
Definition at line 8271 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::a | ( | ::std::unique_ptr< a_type > | p | ) |
Set the attribute value without copying.
p | A new value to use. |
This function will try to use the passed value directly instead of making a copy.
Definition at line 8289 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::a | ( | const a_type & | x | ) |
Set the attribute value.
x | A new value to set. |
This function makes a copy of its argument and sets it as the new value of the attribute.
Definition at line 8283 of file NeuroML_v2.3.cxx.
FitzHughNagumo1969Cell::b_type & neuroml2::FitzHughNagumo1969Cell::b | ( | ) |
Return a read-write reference to the attribute.
Definition at line 8301 of file NeuroML_v2.3.cxx.
const FitzHughNagumo1969Cell::b_type & neuroml2::FitzHughNagumo1969Cell::b | ( | ) | const |
Return a read-only (constant) reference to the attribute.
Definition at line 8295 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::b | ( | ::std::unique_ptr< b_type > | p | ) |
Set the attribute value without copying.
p | A new value to use. |
This function will try to use the passed value directly instead of making a copy.
Definition at line 8313 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::b | ( | const b_type & | x | ) |
Set the attribute value.
x | A new value to set. |
This function makes a copy of its argument and sets it as the new value of the attribute.
Definition at line 8307 of file NeuroML_v2.3.cxx.
FitzHughNagumo1969Cell::I_type & neuroml2::FitzHughNagumo1969Cell::I | ( | ) |
Return a read-write reference to the attribute.
Definition at line 8325 of file NeuroML_v2.3.cxx.
const FitzHughNagumo1969Cell::I_type & neuroml2::FitzHughNagumo1969Cell::I | ( | ) | const |
Return a read-only (constant) reference to the attribute.
Definition at line 8319 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::I | ( | ::std::unique_ptr< I_type > | p | ) |
Set the attribute value without copying.
p | A new value to use. |
This function will try to use the passed value directly instead of making a copy.
Definition at line 8337 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::I | ( | const I_type & | x | ) |
Set the attribute value.
x | A new value to set. |
This function makes a copy of its argument and sets it as the new value of the attribute.
Definition at line 8331 of file NeuroML_v2.3.cxx.
FitzHughNagumo1969Cell & neuroml2::FitzHughNagumo1969Cell::operator= | ( | const FitzHughNagumo1969Cell & | x | ) |
Copy assignment operator.
x | An instance to make a copy of. |
For polymorphic object models use the _clone
function instead.
Definition at line 33031 of file NeuroML_v2.3.cxx.
FitzHughNagumo1969Cell::phi_type & neuroml2::FitzHughNagumo1969Cell::phi | ( | ) |
Return a read-write reference to the attribute.
Definition at line 8349 of file NeuroML_v2.3.cxx.
const FitzHughNagumo1969Cell::phi_type & neuroml2::FitzHughNagumo1969Cell::phi | ( | ) | const |
Return a read-only (constant) reference to the attribute.
Definition at line 8343 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::phi | ( | ::std::unique_ptr< phi_type > | p | ) |
Set the attribute value without copying.
p | A new value to use. |
This function will try to use the passed value directly instead of making a copy.
Definition at line 8361 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::phi | ( | const phi_type & | x | ) |
Set the attribute value.
x | A new value to set. |
This function makes a copy of its argument and sets it as the new value of the attribute.
Definition at line 8355 of file NeuroML_v2.3.cxx.
FitzHughNagumo1969Cell::V0_type & neuroml2::FitzHughNagumo1969Cell::V0 | ( | ) |
Return a read-write reference to the attribute.
Definition at line 8373 of file NeuroML_v2.3.cxx.
const FitzHughNagumo1969Cell::V0_type & neuroml2::FitzHughNagumo1969Cell::V0 | ( | ) | const |
Return a read-only (constant) reference to the attribute.
Definition at line 8367 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::V0 | ( | ::std::unique_ptr< V0_type > | p | ) |
Set the attribute value without copying.
p | A new value to use. |
This function will try to use the passed value directly instead of making a copy.
Definition at line 8385 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::V0 | ( | const V0_type & | x | ) |
Set the attribute value.
x | A new value to set. |
This function makes a copy of its argument and sets it as the new value of the attribute.
Definition at line 8379 of file NeuroML_v2.3.cxx.
FitzHughNagumo1969Cell::W0_type & neuroml2::FitzHughNagumo1969Cell::W0 | ( | ) |
Return a read-write reference to the attribute.
Definition at line 8397 of file NeuroML_v2.3.cxx.
const FitzHughNagumo1969Cell::W0_type & neuroml2::FitzHughNagumo1969Cell::W0 | ( | ) | const |
Return a read-only (constant) reference to the attribute.
Definition at line 8391 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::W0 | ( | ::std::unique_ptr< W0_type > | p | ) |
Set the attribute value without copying.
p | A new value to use. |
This function will try to use the passed value directly instead of making a copy.
Definition at line 8409 of file NeuroML_v2.3.cxx.
void neuroml2::FitzHughNagumo1969Cell::W0 | ( | const W0_type & | x | ) |
Set the attribute value.
x | A new value to set. |
This function makes a copy of its argument and sets it as the new value of the attribute.
Definition at line 8403 of file NeuroML_v2.3.cxx.