Package org.neuroml1.model.morph

Class Cell

java.lang.Object
org.neuroml1.model.morph.Cell
All Implemented Interfaces:
Cloneable, org.jvnet.jaxb2_commons.lang.CopyTo2, org.jvnet.jaxb2_commons.lang.Equals2, org.jvnet.jaxb2_commons.lang.HashCode2, org.jvnet.jaxb2_commons.lang.ToString2
Direct Known Subclasses:
Level3Cell
public class Cell extends Object implements Cloneable, org.jvnet.jaxb2_commons.lang.CopyTo2, org.jvnet.jaxb2_commons.lang.Equals2, org.jvnet.jaxb2_commons.lang.HashCode2, org.jvnet.jaxb2_commons.lang.ToString2
Definition of a cell.

Java class for Cell complex type.

The following schema fragment specifies the expected content contained within this class. 

 <complexType name="Cell">
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <element name="status" type="{http://morphml.org/metadata/schema}Status" minOccurs="0"/>
         <group ref="{http://morphml.org/metadata/schema}metadata"/>
         <group ref="{http://morphml.org/metadata/schema}referencedata"/>
         <element name="segments">
           <complexType>
             <complexContent>
               <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
                 <sequence>
                   <group ref="{http://morphml.org/metadata/schema}metadata"/>
                   <element name="segment" type="{http://morphml.org/morphml/schema}Segment" maxOccurs="unbounded"/>
                 </sequence>
               </restriction>
             </complexContent>
           </complexType>
         </element>
         <element name="cables" minOccurs="0">
           <complexType>
             <complexContent>
               <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
                 <sequence>
                   <group ref="{http://morphml.org/metadata/schema}metadata"/>
                   <element name="cable" type="{http://morphml.org/morphml/schema}Cable" maxOccurs="unbounded"/>
                   <element name="cablegroup" type="{http://morphml.org/morphml/schema}CableGroup" maxOccurs="unbounded" minOccurs="0"/>
                 </sequence>
               </restriction>
             </complexContent>
           </complexType>
         </element>
         <element name="cellBody" minOccurs="0">
           <complexType>
             <complexContent>
               <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
                 <sequence>
                   <group ref="{http://morphml.org/metadata/schema}metadata"/>
                   <choice>
                     <element name="polygon" type="{http://morphml.org/metadata/schema}Polygon"/>
                     <element name="polyhedron" type="{http://morphml.org/metadata/schema}Polyhedron"/>
                     <element name="sphere" type="{http://morphml.org/metadata/schema}Sphere"/>
                   </choice>
                 </sequence>
               </restriction>
             </complexContent>
           </complexType>
         </element>
         <element name="spines" minOccurs="0">
           <complexType>
             <complexContent>
               <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
                 <sequence>
                   <group ref="{http://morphml.org/metadata/schema}metadata"/>
                   <element name="spine" type="{http://morphml.org/morphml/schema}Spine" maxOccurs="unbounded"/>
                 </sequence>
               </restriction>
             </complexContent>
           </complexType>
         </element>
         <element name="freePoints" type="{http://morphml.org/morphml/schema}FreePoints" minOccurs="0"/>
       </sequence>
       <attribute name="name" type="{http://www.w3.org/2001/XMLSchema}string" />
     </restriction>
   </complexContent>
 </complexType>

  • Field Details

  • Constructor Details

    • Cell

      public Cell()

  • Method Details

    • getStatus

      public Status getStatus()
      Gets the value of the status property.
      Returns:
      possible object is Status

    • setStatus

      public void setStatus(Status value)
      Sets the value of the status property.
      Parameters:
      value - allowed object is Status

    • getNotes

      public String getNotes()
      Gets the value of the notes property.
      Returns:
      possible object is String

    • setNotes

      public void setNotes(String value)
      Sets the value of the notes property.
      Parameters:
      value - allowed object is String

    • getProperties

      public Properties getProperties()
      Gets the value of the properties property.
      Returns:
      possible object is Properties

    • setProperties

      public void setProperties(Properties value)
      Sets the value of the properties property.
      Parameters:
      value - allowed object is Properties

    • getAnnotation

      public Annotation getAnnotation()
      Gets the value of the annotation property.
      Returns:
      possible object is Annotation

    • setAnnotation

      public void setAnnotation(Annotation value)
      Sets the value of the annotation property.
      Parameters:
      value - allowed object is Annotation

    • getGroup

      public List<String> getGroup()
      Gets the value of the group property.

      This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the group property.

      For example, to add a new item, do as follows: 

          getGroup().add(newItem);

      Objects of the following type(s) are allowed in the list String

    • getAuthorList

      public Authors getAuthorList()
      Gets the value of the authorList property.
      Returns:
      possible object is Authors

    • setAuthorList

      public void setAuthorList(Authors value)
      Sets the value of the authorList property.
      Parameters:
      value - allowed object is Authors

    • getPublication

      public List<Publication> getPublication()
      Gets the value of the publication property.

      This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the publication property.

      For example, to add a new item, do as follows: 

          getPublication().add(newItem);

      Objects of the following type(s) are allowed in the list Publication

    • getNeuronDBref

      public List<NeuronDBReference> getNeuronDBref()
      Gets the value of the neuronDBref property.

      This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the neuronDBref property.

      For example, to add a new item, do as follows: 

          getNeuronDBref().add(newItem);

      Objects of the following type(s) are allowed in the list NeuronDBReference

    • getModelDBref

      public List<ModelDBReference> getModelDBref()
      Gets the value of the modelDBref property.

      This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the modelDBref property.

      For example, to add a new item, do as follows: 

          getModelDBref().add(newItem);

      Objects of the following type(s) are allowed in the list ModelDBReference

    • getNeuroMorphoRef

      public List<NeuroMorphoRef> getNeuroMorphoRef()
      Gets the value of the neuroMorphoRef property.

      This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the neuroMorphoRef property.

      For example, to add a new item, do as follows: 

          getNeuroMorphoRef().add(newItem);

      Objects of the following type(s) are allowed in the list NeuroMorphoRef

    • getSegments

      public Cell.Segments getSegments()
      Gets the value of the segments property.
      Returns:
      possible object is Cell.Segments

    • setSegments

      public void setSegments(Cell.Segments value)
      Sets the value of the segments property.
      Parameters:
      value - allowed object is Cell.Segments

    • getCables

      public Cell.Cables getCables()
      Gets the value of the cables property.
      Returns:
      possible object is Cell.Cables

    • setCables

      public void setCables(Cell.Cables value)
      Sets the value of the cables property.
      Parameters:
      value - allowed object is Cell.Cables

    • getCellBody

      public Cell.CellBody getCellBody()
      Gets the value of the cellBody property.
      Returns:
      possible object is Cell.CellBody

    • setCellBody

      public void setCellBody(Cell.CellBody value)
      Sets the value of the cellBody property.
      Parameters:
      value - allowed object is Cell.CellBody

    • getSpines

      public Cell.Spines getSpines()
      Gets the value of the spines property.
      Returns:
      possible object is Cell.Spines

    • setSpines

      public void setSpines(Cell.Spines value)
      Sets the value of the spines property.
      Parameters:
      value - allowed object is Cell.Spines

    • getFreePoints

      public FreePoints getFreePoints()
      Gets the value of the freePoints property.
      Returns:
      possible object is FreePoints

    • setFreePoints

      public void setFreePoints(FreePoints value)
      Sets the value of the freePoints property.
      Parameters:
      value - allowed object is FreePoints

    • getName

      public String getName()
      Gets the value of the name property.
      Returns:
      possible object is String

    • setName

      public void setName(String value)
      Sets the value of the name property.
      Parameters:
      value - allowed object is String

    • toString

      public String toString()
      Overrides:
      toString in class Object

    • append

      public StringBuilder append(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, StringBuilder buffer, org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)
      Specified by:
      append in interface org.jvnet.jaxb2_commons.lang.ToString2

    • appendFields

      public StringBuilder appendFields(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, StringBuilder buffer, org.jvnet.jaxb2_commons.lang.ToStringStrategy2 strategy)
      Specified by:
      appendFields in interface org.jvnet.jaxb2_commons.lang.ToString2

    • equals

      public boolean equals(org.jvnet.jaxb2_commons.locator.ObjectLocator thisLocator, org.jvnet.jaxb2_commons.locator.ObjectLocator thatLocator, Object object, org.jvnet.jaxb2_commons.lang.EqualsStrategy2 strategy)
      Specified by:
      equals in interface org.jvnet.jaxb2_commons.lang.Equals2

    • equals

      public boolean equals(Object object)
      Overrides:
      equals in class Object

    • hashCode

      public int hashCode(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, org.jvnet.jaxb2_commons.lang.HashCodeStrategy2 strategy)
      Specified by:
      hashCode in interface org.jvnet.jaxb2_commons.lang.HashCode2

    • hashCode

      public int hashCode()
      Overrides:
      hashCode in class Object

    • clone

      public Object clone()
      Overrides:
      clone in class Object

    • copyTo

      public Object copyTo(Object target)
      Specified by:
      copyTo in interface org.jvnet.jaxb2_commons.lang.CopyTo2

    • copyTo

      public Object copyTo(org.jvnet.jaxb2_commons.locator.ObjectLocator locator, Object target, org.jvnet.jaxb2_commons.lang.CopyStrategy2 strategy)
      Specified by:
      copyTo in interface org.jvnet.jaxb2_commons.lang.CopyTo2

    • createNewInstance

      public Object createNewInstance()
      Specified by:
      createNewInstance in interface org.jvnet.jaxb2_commons.lang.CopyTo2

    • getSegmentList

      public List<Segment> getSegmentList()
      Get the list of segments representing this cell.

    • getCableList

      public List<Cable> getCableList()
      Get the list of cables for this Cell.