Package org.lemsml.export.sedml

Class SEDMLWriter

java.lang.Object

org.lemsml.export.base.ABaseWriter

org.lemsml.export.base.AXMLWriter

org.lemsml.export.sedml.SEDMLWriter

All Implemented Interfaces:

IBaseWriter

public class SEDMLWriter
extends AXMLWriter

Field Summary

Fields

Modifier and Type	Field	Description
static String	GLOBAL_TIME_SBML
static String	GLOBAL_TIME_SBML_MATHML
static String	PREF_SEDML_SCHEMA
static int	SEDML_LEVEL
static int	SEDML_VERSION

Fields inherited from class org.lemsml.export.base.AXMLWriter

INDENT

Fields inherited from class org.lemsml.export.base.ABaseWriter

format, lems, sli

Constructor Summary

Constructors

Constructor	Description
SEDMLWriter(org.lemsml.jlems.core.type.Lems lems)
SEDMLWriter(org.lemsml.jlems.core.type.Lems lems, File outputFolder, String outputFileName, String inputFileName)
SEDMLWriter(org.lemsml.jlems.core.type.Lems lems, File outputFolder, String outputFileName, String inputFileName, Format modelFormat)

Method Summary

Modifier and Type	Method	Description
List<File>	convert()
String	getMainScript()
static void	main(String[] args)
void	setSupportedFeatures()

Methods inherited from class org.lemsml.export.base.AXMLWriter

addComment, addComment, addTextElement, endElement, getIndent, processAttr, processMathML, processMathML, processMathML, startElement, startElement, startElement, startElement, startElement, startElement, startElement, startElement, startElement, startElement, startElement, startElement, startElement, startEndElement, startEndElement, startEndElement, startEndElement, startEndElement, startEndElement, startEndElement, startEndTextElement

Methods inherited from class org.lemsml.export.base.ABaseWriter

getOutputFileName, getOutputFolder, setOutputFileName, setOutputFolder

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

SEDML_LEVEL

public static final int SEDML_LEVEL

See Also:

Constant Field Values

SEDML_VERSION

public static final int SEDML_VERSION

See Also:

Constant Field Values

PREF_SEDML_SCHEMA

public static final String PREF_SEDML_SCHEMA

See Also:

Constant Field Values

GLOBAL_TIME_SBML

public static final String GLOBAL_TIME_SBML

See Also:

Constant Field Values

GLOBAL_TIME_SBML_MATHML

public static final String GLOBAL_TIME_SBML_MATHML

See Also:

Constant Field Values

Constructor Detail

SEDMLWriter

public SEDMLWriter(org.lemsml.jlems.core.type.Lems lems,
                   File outputFolder,
                   String outputFileName,
                   String inputFileName,
                   Format modelFormat)
            throws ModelFeatureSupportException,
                   org.neuroml.model.util.NeuroMLException,
                   org.lemsml.jlems.core.sim.LEMSException

Throws:

ModelFeatureSupportException

org.neuroml.model.util.NeuroMLException

org.lemsml.jlems.core.sim.LEMSException

SEDMLWriter

public SEDMLWriter(org.lemsml.jlems.core.type.Lems lems)
            throws ModelFeatureSupportException,
                   org.neuroml.model.util.NeuroMLException,
                   org.lemsml.jlems.core.sim.LEMSException

Throws:

ModelFeatureSupportException

org.neuroml.model.util.NeuroMLException

org.lemsml.jlems.core.sim.LEMSException

SEDMLWriter

public SEDMLWriter(org.lemsml.jlems.core.type.Lems lems,
                   File outputFolder,
                   String outputFileName,
                   String inputFileName)
            throws ModelFeatureSupportException,
                   org.neuroml.model.util.NeuroMLException,
                   org.lemsml.jlems.core.sim.LEMSException

Throws:

ModelFeatureSupportException

org.neuroml.model.util.NeuroMLException

org.lemsml.jlems.core.sim.LEMSException

Method Detail

setSupportedFeatures

public void setSupportedFeatures()

getMainScript

public String getMainScript()
                     throws org.lemsml.jlems.core.sim.ContentError

Throws:

org.lemsml.jlems.core.sim.ContentError

convert

public List<File> convert()
                   throws IOException,
                          GenerationException

Throws:

IOException

GenerationException

main

public static void main(String[] args)
                 throws Exception,
                        ModelFeatureSupportException

Throws:

Exception

ModelFeatureSupportException